Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804241.1_cds_XP_016487956.1_7831
CDS Infomation

[gene=LOC107807989] [db_xref=GeneID:107807989] [protein=probable protein phosphatase 2C 24 isoform X1] [protein_id=XP_016487956.1] [location=join(10513..10992,11406..11720,11849..11954,12062..12393)] [gbkey=CDS]
Sequence

ATGGCAGAGGTCTGCTCTGGAGTAGTGACTGAAACCGAGGCATCGCCGCCGTGCGAGTCA
CGTTCACAAACGGCGAGCCGGAGGAGAATGGAGCTCCGCAAGGTAAAATTTATTGCCGGC
GTAACTCCACCAGAAACAGAGAACGAAATAATTAAACGTCCAAAATTAAAGCTTTATTCC
ACCTCTGTTTCAAGATTCTGTGATAACGCTGTACACAATTCTAGCACCGACGATGAAGAC
CAAGTGAAATTAGGGGCACCGCCAACTATTGTTTTGGCTCCAATTTTAAGTCCTTTGAAT
AATTTGACTCTTCTTGTTCAGTCGGTGGTGAGTCCAAAATTCGGGTTCACCTCTGTTTGC
GGACGGAGGAGAGATATGGAAGATGCGGTGGCGATTCATCCATCTTTTTGCCAAATGAAA
CAGGAAAACAGTGGAGAATTGCATTACTTTGCCGTATATGATGGTCATGGATGTTCTCAT
GTGGCGACGAAGTGTGAAGAGCGATTACACGAGCTGGTGAAAGAAGAGTTGGAAAATAAC
GAAGGAAATGACCAGTGGGAGCTTGCAATGGACCGAAGCTTCGATCGTATGGACAAGGAA
GTAATTGCATGGAACAAGAGCATGATTCGTGCGACGTGTCGGTGCGAGCTTCAAACGCCG
GAATGTGACGCCGTCGGTTCAACGGCGGTAGTTGCTGTCGTTACGGCCGATAAGATTATC
GTTGCCAATTGTGGCGATTCTAGAGCTATTCTTTGCCGAAATGGCAAAGCCATCCCTCTC
TCTAACGATCAAAAGCCGGATCGTCCAGATGAGCTAAACCGGATTCAAGAAGCTGGTGGC
AGAGTAATTTATTGGGATGGCCCTCGCGTTTCAGGCGTTTTGGCTATGTCAAGAGCCATT
GGTGATAATTATTTGAAGCCGTATGTGATATGCGAGCCAGAGGTGACAATAACAGATCGA
ACGGTGGAAGATGACTGTTTAATTCTGGCAAGCGACGGATTGTGGGATGTAGTGTCAAAC
GATACTGCATGCGGCGTTGCCGGAATGTGCCTGAATAAAGGGAAGGCACCAGTATCAAGT
GCAGCGGCGTCTATGCCGGAAAATGTAGCCGGCGGGGAGAATCCCGACCAGGGTTGCGCC
GATGCGTCTATGCTTTTGACGAAACTAGCCCTGGCGAGGCGGAGTTCGGACAACGTCAGC
GTTGTCGTGGTTGATCTAAGGAGGAACTCGTAG

Peptide Sequence

PEP ID

XP_016487956.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 24 isoform X1 [Nicotiana tabacum]
Sequence

MAEVCSGVVTETEASPPCESRSQTASRRRMELRKVKFIAGVTPPETENEIIKRPKLKLYS
TSVSRFCDNAVHNSSTDDEDQVKLGAPPTIVLAPILSPLNNLTLLVQSVVSPKFGFTSVC
GRRRDMEDAVAIHPSFCQMKQENSGELHYFAVYDGHGCSHVATKCEERLHELVKEELENN
EGNDQWELAMDRSFDRMDKEVIAWNKSMIRATCRCELQTPECDAVGSTAVVAVVTADKII
VANCGDSRAILCRNGKAIPLSNDQKPDRPDELNRIQEAGGRVIYWDGPRVSGVLAMSRAI
GDNYLKPYVICEPEVTITDRTVEDDCLILASDGLWDVVSNDTACGVAGMCLNKGKAPVSS
AAASMPENVAGGENPDQGCADASMLLTKLALARRSSDNVSVVVVDLRRNS

Transcript Sequence

Gene sequence data has not been registered.